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Ninoy Aquino International Airport to El Nido ENI Airport flight

Search for flights from Manila to El Nido and check out affordable one-way and round-trip options.

      • Cheapest nonstop
        MNL 04:45
        1h 30m
        Direct
        ENI 06:15
        Manila - El Nido | Mon, Aug 10 | AirSWIFT AirLine
        ENI 11:55
        1h 30m
        Direct
        MNL 13:25
        El Nido - Manila | Thu, Aug 13 | AirSWIFT AirLine
        MYR 1,082 MYR 1,190
        9% off
        9% off
        MYR 1,190 MYR 1,082
      • MNL 16:15
        4h 35m
        1 stop
        ENI 20:50
        Manila - El Nido | Fri, Sep 4 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Fri, Sep 11 | Cebgo
        MYR 461 MYR 1,190
        61% off
        61% off
        MYR 1,190 MYR 461
      • MNL 16:15
        4h 20m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Sun, Sep 6 | Cebgo
        MYR 485 MYR 1,190
        59% off
        59% off
        MYR 1,190 MYR 485
      • MNL 04:50
        12h 40m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Philippine Airlines
        ENI 16:40
        6h 40m
        1 stop
        MNL 23:20
        El Nido - Manila | Sat, Sep 5 | Cebgo
        MYR 502
        57% off
        MYR 1,190 MYR 502
      • MNL 09:35
        7h 55m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Cebu Pacific
        ENI 16:40
        7h 30m
        1 stop
        MNL 00:10
        El Nido - Manila | Sat, Sep 5 | Cebgo
        MYR 524
        56% off
        MYR 1,190 MYR 524
      • MNL 06:45
        10h 45m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Fri, Sep 4 | Cebgo
        MYR 704
        41% off
        MYR 1,190 MYR 704
      • MNL 03:50
        7h 20m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Cebu Pacific
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Mon, Sep 7 | Cebgo
        MYR 727
        39% off
        MYR 1,190 MYR 727
      • MNL 16:15
        4h 35m
        1 stop
        ENI 20:50
        Manila - El Nido | Wed, Sep 2 | Cebu Pacific
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Mon, Sep 7 | Cebgo
        MYR 730
        39% off
        MYR 1,190 MYR 730
      • MNL 05:55
        5h 15m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Philippines AirAsia Inc
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Thu, Sep 10 | Cebgo
        MYR 893
        25% off
        MYR 1,190 MYR 893
      • MNL 15:00
        5h 35m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Aug 27 | Cebu Pacific
        ENI 13:25
        6h 45m
        1 stop
        MNL 20:10
        El Nido - Manila | Sat, Aug 29 | Cebgo
        MYR 959
        19% off
        MYR 1,190 MYR 959
      • MNL 12:10
        4h 50m
        1 stop
        ENI 17:00
        Manila - El Nido | Sat, Aug 29 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Wed, Sep 2 | Cebgo
        MYR 981
        18% off
        MYR 1,190 MYR 981
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Sat, Jul 11 | Normal Airline
        ENI 15:00
        6h
        Direct
        MNL 16:00
        El Nido - Manila | Mon, Jul 13 | Normal Airline
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      • MNL 15:00
        5h 35m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Cebu Pacific
        MYR 237 MYR 502
        53% off
        53% off
        MYR 502 MYR 237
      • MNL 18:05
        23h 25m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Cebu Pacific
        MYR 263 MYR 502
        48% off
        48% off
        MYR 502 MYR 263
      • MNL 03:50
        7h 20m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Cebu Pacific
        MYR 266 MYR 502
        47% off
        47% off
        MYR 502 MYR 266
      • MNL 05:55
        14h 40m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Philippines AirAsia Inc
        MYR 269
        46% off
        MYR 502 MYR 269
      • MNL 04:50
        12h 40m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Philippine Airlines
        MYR 274
        45% off
        MYR 502 MYR 274
      • MNL 09:35
        7h 55m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Cebu Pacific
        MYR 309
        38% off
        MYR 502 MYR 309
      • MNL 15:45
        25h 45m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Philippine Airlines
        MYR 323
        36% off
        MYR 502 MYR 323
      • MNL 06:45
        10h 15m
        1 stop
        ENI 17:00
        Manila - El Nido | Fri, Aug 28 | Philippines AirAsia Inc
        MYR 449
        11% off
        MYR 502 MYR 449
      • MNL 08:15
        8h 45m
        1 stop
        ENI 17:00
        Manila - El Nido | Fri, Aug 28 | Cebu Pacific
        MYR 452
        10% off
        MYR 502 MYR 452
      • MNL 11:50
        8h 45m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Philippine Airlines
        MYR 456
        9% off
        MYR 502 MYR 456
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Sat, Jul 11 | Normal Airline
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        Find more flights

Flight prices from Ninoy Aquino International Airport to El Nido ENI Airport are based on the average fares across airlines for the next three months, based on Trip.com’s latest data.

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to El Nido ENI Airport

Which month has the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average one-way fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in October, with an average price of MYR 496. June sees the highest fares, around MYR 847.

MYR 847
MYR 672
MYR 496
MYR 321
    Cheapest
  • MYR 561
    Jul
  • MYR 568
    Aug
  • MYR 522
    Sep
  • MYR 496
    Oct
  • MYR 656
    Nov
  • MYR 689
    Dec
  • MYR 573
    Jan
  • MYR 668
    Feb
  • MYR 630
    Mar
  • MYR 694
    Apr
  • MYR 794
    May
  • MYR 847
    Jun

Which month has the cheapest round-trip flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average round-trip fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest round‑trip flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in April, with an average price of MYR 919. June sees the highest fares, around MYR 1,594.

MYR 1,594
MYR 1,257
MYR 919
MYR 582
    Cheapest
  • MYR 1,110
    Jul
  • MYR 1,066
    Aug
  • MYR 1,055
    Sep
  • MYR 1,146
    Oct
  • MYR 1,313
    Nov
  • MYR 1,407
    Dec
  • MYR 1,165
    Jan
  • MYR 1,342
    Feb
  • MYR 1,375
    Mar
  • MYR 919
    Apr
  • MYR 1,103
    May
  • MYR 1,594
    Jun

Which day of the week has the cheapest flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average fares by each day of the week from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest day for flights from Ninoy Aquino International Airport to El Nido ENI Airport is Thursday, with average prices lower than other days. Try to avoid departing on Monday, as fares are typically the highest.

MYR 681
MYR 659
MYR 637
MYR 615
    Cheapest
  • MYR 681
    Mon
  • MYR 667
    Tue
  • MYR 677
    Wed
  • MYR 637
    Thu
  • MYR 655
    Fri
  • MYR 667
    Sat
  • MYR 637
    Sun

Selected Airlines from Ninoy Aquino International Airport to El Nido ENI Airport

See which airlines fly from Manila to El Nido. Find the airline that best meets your travel needs by comparing prices and treat yourself to an enjoyable journey.

Cebu Pacific
From MYR 237
Philippines AirAsia Inc
From MYR 269
Philippine Airlines
From MYR 274

Find more flights and airlines

Flight Schedule from Ninoy Aquino International Airport to El Nido ENI Airport

Check the schedule for flights from Manila to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. Z2781

    Ninoy Aquino International Airport

    16:00

    MNL

    1h 25m

    Direct

    17:25

    CEB

    S M T W T F S
    Search

  2. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S

  3. 5J903

    Ninoy Aquino International Airport

    12:10

    MNL

    1h 10m

    Direct

    13:20

    MPH

    S M T W T F S
    Search

  4. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  5. PR2037

    Ninoy Aquino International Airport

    12:10

    MNL

    1h

    Direct

    13:10

    MPH

    S M T W T F S
    Search

  6. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  7. 5J581

    Ninoy Aquino International Airport

    15:00

    MNL

    1h 30m

    Direct

    16:30

    CEB

    S M T W T F S
    Search

  8. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S

  9. Z2219

    Ninoy Aquino International Airport

    07:25

    MNL

    1h

    Direct

    08:25

    MPH

    - M - W - F -
    Search

  10. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  11. Z2221

    Ninoy Aquino International Airport

    10:40

    MNL

    1h

    Direct

    11:40

    MPH

    S M T W T F S
    Search

  12. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  13. 5J563

    Ninoy Aquino International Airport

    03:40

    MNL

    1h 40m

    Direct

    05:20

    CEB

    S M T W T F S
    Search

  14. DG5337

    Mactan-Cebu International Airport

    09:20

    CEB

    1h 50m

    Direct

    11:10

    ENI

    S M T W T F S

  15. 5J617

    Ninoy Aquino International Airport

    09:35

    MNL

    1h 45m

    Direct

    11:20

    TAG

    S M T W T F S
    Search

  16. DG5611

    Panglao International Airport

    15:40

    TAG

    1h 45m

    Direct

    17:25

    ENI

    S - - W - F -

  17. 5J901

    Ninoy Aquino International Airport

    08:15

    MNL

    1h 10m

    Direct

    09:25

    MPH

    S M T W T F S
    Search

  18. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  19. PR2853

    Ninoy Aquino International Airport

    12:20

    MNL

    1h 20m

    Direct

    13:40

    CEB

    - M - W T F S
    Search

  20. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S
Find more flights and airlines

Ninoy Aquino International Airport to El Nido ENI Airport Flights Info

Flight distance 407.32km
Cheapest one-way ticket price MYR 237
Cheapest return ticket price MYR 461

FAQs for Ninoy Aquino International Airport to El Nido ENI Airport Flights

  • How long is a flight from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI)?

    It takes around 1 hour 33 minutes to fly from Ninoy Aquino International Airport (mnl) to El Nido ENI Airport (eni).
  • There are around 2 daily flights from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI).
  • Tickets cost around MYR 988 in March, making it the cheapest month to book. Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI) is a popular route, so don't forget to book your tickets in advance.
  • The route from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI) is quite popular. Without considering departure times or holidays, tickets cost around MYR 988 in March, the most expensive month to book this route.
  • The earliest flight departs from Ninoy Aquino International Airport (MNL) at 05:15 and arrives in El Nido ENI Airport (ENI) at 06:45.
  • The latest flight departs from Ninoy Aquino International Airport (MNL) at 18:00 and arrives in El Nido ENI Airport (ENI) at 19:30.
    • The distance from El Nido Airport to downtown is about 5km, by taxi about 20 minutes.
  • AirSWIFT AirLine is a very popular airline operating an average of 6624 flights per month.

Popular Destinations & Recommendations

Note: Prices shown on this page are the lowest estimated prices found in the last 24 hours and include all taxes and fees.

Book with no extra fees

Prices displayed on this page are all-inclusive (incl. taxes, fuel surcharges, Civil Aviation Development Fund, etc.), and all fees are shown before payment. Charges for checked baggage, meals, Wi-Fi, and other optional services may also appear in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours, and with many routes refreshed in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the change and cancellation rules for each ticket during the booking process, including all related fees and conditions. Please refer to the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply based on the airline’s fare rules.
Cancellation/change due to a flight schedule change:
If your flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For full details of change and cancellation policies, please refer to the customer support pages.