Trip.com
>
Flights
>
Philippines
>
Mimaropa
>
Flights to El Nido
>
Manila to El Nido flight
>
Ninoy Aquino International Airport to El Nido ENI Airport flight
174K verified reviews | Excellent 4.4/5 rating on Trustpilot
Earn Trip Coins and airline miles, all in one booking
All-inclusive prices (incl. taxes, fuel surcharges, baggage) with no hidden fees
24/7 customer support in 24+ languages

Ninoy Aquino International Airport to El Nido ENI Airport Flights Info

Cheapest one-way
HK$ 1,154
Cebu Pacific Cebu Pacific 7h 20m · 1 stop Sat, Jan 9
Book Now
Cheapest return
HK$ 2,052
Cebu Pacific Cebu Pacific 6h 45m · 2 stops Fri, Dec 11 - Wed, Dec 16
Book Now
Best time to book
January
Cheapest
Recommended airlines
Cebu Pacific Cebu PacificCheapest· From HK$ 1,154 Cebu Pacific Cebu PacificMost booked

Explore the cheapest one-way and round-trip flights from Ninoy Aquino International Airport to El Nido ENI Airport over the next 90 days, with one-way fares from HK$ 1,145 and round-trip from HK$ 2,052. Based on Trip.com's latest 7-day flight data.

    • Cheapest
      MNL 22:40
      7h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Jan 9 | Cebu Pacific
      HK$ 1,154 HK$ 1,895
      39% off
      39% off
      HK$ 1,895 HK$ 1,154
    • MNL 22:50
      7h 10m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Dec 12 | Cebu Pacific
      HK$ 1,167 HK$ 1,895
      38% off
      38% off
      HK$ 1,895 HK$ 1,167
    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Thu, Dec 10 | Cebu Pacific
      HK$ 1,194 HK$ 1,895
      37% off
      37% off
      HK$ 1,895 HK$ 1,194
    • MNL 20:45
      9h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Dec 7 | Cebu Pacific
      HK$ 1,202
      37% off
      HK$ 1,895 HK$ 1,202
    • MNL 19:35
      10h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Nov 21 | Cebu Pacific
      HK$ 1,274
      33% off
      HK$ 1,895 HK$ 1,274
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Dec 7 | Philippines AirAsia Inc
      HK$ 1,281
      32% off
      HK$ 1,895 HK$ 1,281
    • MNL 11:30
      5h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Dec 15 | Cebu Pacific
      HK$ 1,297
      32% off
      HK$ 1,895 HK$ 1,297
    • MNL 18:10
      11h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Dec 5 | Philippines AirAsia Inc
      HK$ 1,301
      31% off
      HK$ 1,895 HK$ 1,301
    • MNL 07:25
      9h 55m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Dec 15 | Philippines AirAsia Inc
      HK$ 1,326
      30% off
      HK$ 1,895 HK$ 1,326
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Wed, Nov 18 | Normal Airline
      Find more flights
      Find more flights
    • MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Dec 11 | Cebu Pacific
      ENI 05:50
      8h
      1 stop
      MNL 13:50
      El Nido - Manila | Wed, Dec 16 | Cebgo
      HK$ 2,052 HK$ 3,484
      41% off
      41% off
      HK$ 3,484 HK$ 2,052
    • MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Dec 12 | Cebu Pacific
      ENI 05:50
      3h 50m
      1 stop
      MNL 09:40
      El Nido - Manila | Fri, Dec 18 | Cebgo
      HK$ 2,276 HK$ 3,484
      35% off
      35% off
      HK$ 3,484 HK$ 2,276
    • MNL 08:35
      21h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Dec 2 | Philippines AirAsia Inc
      ENI 13:35
      8h 35m
      1 stop
      MNL 22:10
      El Nido - Manila | Mon, Dec 7 | Cebgo
      HK$ 2,353 HK$ 3,484
      32% off
      32% off
      HK$ 3,484 HK$ 2,353
    • MNL 12:25
      8h 10m
      1 stop
      ENI 20:35
      Manila - El Nido | Wed, Dec 2 | Cebu Pacific
      ENI 14:25
      4h 35m
      1 stop
      MNL 19:00
      El Nido - Manila | Wed, Dec 9 | Cebgo
      HK$ 2,369
      32% off
      HK$ 3,484 HK$ 2,369
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Dec 11 | Philippines AirAsia Inc
      ENI 08:25
      10h
      1 stop
      MNL 18:25
      El Nido - Manila | Thu, Dec 17 | Cebgo
      HK$ 2,405
      31% off
      HK$ 3,484 HK$ 2,405
    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Thu, Dec 10 | Cebu Pacific
      ENI 06:20
      7h 30m
      1 stop
      MNL 13:50
      El Nido - Manila | Sat, Dec 12 | Cebgo
      HK$ 2,426
      30% off
      HK$ 3,484 HK$ 2,426
    • MNL 20:35
      9h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Dec 6 | Cebu Pacific
      ENI 05:50
      8h 25m
      1 stop
      MNL 14:15
      El Nido - Manila | Sun, Dec 13 | Cebgo
      HK$ 2,448
      30% off
      HK$ 3,484 HK$ 2,448
    • MNL 23:40
      6h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Dec 9 | Cebu Pacific
      ENI 05:50
      18h 5m
      1 stop
      MNL 23:55
      El Nido - Manila | Tue, Dec 15 | Cebgo
      HK$ 2,464
      28% off
      HK$ 3,484 HK$ 2,464
    • MNL 16:20
      13h 40m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Dec 11 | Philippine Airlines
      ENI 08:25
      10h
      1 stop
      MNL 18:25
      El Nido - Manila | Thu, Dec 17 | Cebgo
      HK$ 2,472
      28% off
      HK$ 3,484 HK$ 2,472
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Wed, Nov 18 | Normal Airline
      ENI 15:00
      6h
      Direct
      MNL 16:00
      El Nido - Manila | Fri, Nov 20 | Normal Airline
      Find more flights
      Find more flights
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 17 | Philippine Airlines
      HK$ 1,145 HK$ 3,664
      69% off
      69% off
      HK$ 3,664 HK$ 1,145
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 24 | Philippine Airlines
      HK$ 1,170 HK$ 3,664
      68% off
      68% off
      HK$ 3,664 HK$ 1,170
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 19 | Cebu Pacific
      HK$ 1,309 HK$ 3,664
      64% off
      64% off
      HK$ 3,664 HK$ 1,309
    • MNL 23:10
      6h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Nov 23 | Philippine Airlines
      HK$ 1,350
      63% off
      HK$ 3,664 HK$ 1,350
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 21 | Cebu Pacific
      HK$ 1,355
      63% off
      HK$ 3,664 HK$ 1,355
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Dec 15 | Cebu Pacific
      HK$ 1,371
      63% off
      HK$ 3,664 HK$ 1,371
    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Dec 4 | Cebu Pacific
      HK$ 1,397
      62% off
      HK$ 3,664 HK$ 1,397
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Tue, Jan 26 | Cebu Pacific
      HK$ 1,576
      56% off
      HK$ 3,664 HK$ 1,576
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Dec 12 | Cebu Pacific
      HK$ 1,601
      56% off
      HK$ 3,664 HK$ 1,601
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Wed, Nov 18 | Normal Airline
      Find more flights
      Find more flights
    • MNL 04:25
      5h 30m
      1 stop
      ENI 09:55
      Manila - El Nido | Tue, Nov 17 | Philippines AirAsia Inc
      HK$ 2,346 HK$ 4,035
      42% off
      42% off
      HK$ 4,035 HK$ 2,346
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 17 | Philippine Airlines
      HK$ 1,145 HK$ 4,035
      72% off
      72% off
      HK$ 4,035 HK$ 1,145
    • MNL 15:35
      14h 25m
      2 stops
      ENI 06:00
      Manila - El Nido | Tue, Nov 17 | Cebu Pacific
      HK$ 2,160 HK$ 4,035
      46% off
      46% off
      HK$ 4,035 HK$ 2,160
    • MNL 04:25
      6h
      1 stop
      ENI 10:25
      Manila - El Nido | Thu, Nov 19 | Philippines AirAsia Inc
      HK$ 2,905
      28% off
      HK$ 4,035 HK$ 2,905
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 19 | Cebu Pacific
      HK$ 1,309
      68% off
      HK$ 4,035 HK$ 1,309
    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Cebu Pacific
      HK$ 1,705
      57% off
      HK$ 4,035 HK$ 1,705
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 21 | Cebu Pacific
      HK$ 1,355
      66% off
      HK$ 4,035 HK$ 1,355
    • MNL 04:15
      5h 40m
      1 stop
      ENI 09:55
      Manila - El Nido | Sun, Nov 22 | Cebu Pacific
      HK$ 2,026
      50% off
      HK$ 4,035 HK$ 2,026
    • MNL 23:10
      6h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Nov 23 | Philippine Airlines
      HK$ 1,350
      67% off
      HK$ 4,035 HK$ 1,350
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Wed, Nov 18 | Normal Airline
      Find more flights
      Find more flights
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 3 | Philippine Airlines
      HK$ 1,637 HK$ 4,371
      63% off
      63% off
      HK$ 4,371 HK$ 1,637
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Dec 1 | Philippine Airlines
      HK$ 1,928 HK$ 4,371
      56% off
      56% off
      HK$ 4,371 HK$ 1,928
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 17 | Philippine Airlines
      HK$ 1,993 HK$ 4,371
      54% off
      54% off
      HK$ 4,371 HK$ 1,993
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 24 | Philippine Airlines
      HK$ 2,119
      52% off
      HK$ 4,371 HK$ 2,119
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 26 | Philippine Airlines
      HK$ 2,233
      49% off
      HK$ 4,371 HK$ 2,233
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Jan 29 | Philippine Airlines
      HK$ 2,049
      53% off
      HK$ 4,371 HK$ 2,049
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 27 | Philippine Airlines
      HK$ 2,085
      52% off
      HK$ 4,371 HK$ 2,085
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Dec 11 | Philippine Airlines
      HK$ 2,271
      48% off
      HK$ 4,371 HK$ 2,271
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Sat, Nov 28 | Philippine Airlines
      HK$ 2,307
      47% off
      HK$ 4,371 HK$ 2,307
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Wed, Nov 18 | Normal Airline
      Find more flights
      Find more flights

Crossed out prices are calculated based on the average price of the corresponding route on Trip.com.

Which airline offers the cheapest flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The cheapest airline flying from Ninoy Aquino International Airport to El Nido ENI Airport is Cebu Pacific (from HK$ 1,154) among 1 carriers operating this route. Based on Trip.com's latest 7-day flight data.
Scoot logo Scoot Singapore Airlines logo Singapore Airlines
Cebu Pacific logo Cebu Pacific

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to El Nido ENI Airport

Which month has the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average one-way fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in January, with an average price of HK$ 1,122. August sees the highest fares, around HK$ 1,671.

HK$ 1,671
HK$ 1,397
HK$ 1,122
HK$ 848
    Cheapest
  • HK$ 1,362
    Nov
  • HK$ 1,350
    Dec
  • HK$ 1,122
    Jan
  • HK$ 1,307
    Feb
  • HK$ 1,233
    Mar
  • HK$ 1,359
    Apr
  • HK$ 1,555
    May
  • HK$ 1,659
    Jun
  • HK$ 1,566
    Jul
  • HK$ 1,671
    Aug
  • HK$ 1,414
    Sep
  • HK$ 1,419
    Oct

Which month has the cheapest round-trip flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average round-trip fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest round‑trip flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in April, with an average price of HK$ 1,801. July sees the highest fares, around HK$ 3,947.

HK$ 3,947
HK$ 2,874
HK$ 1,801
HK$ 728
    Cheapest
  • HK$ 2,576
    Nov
  • HK$ 2,755
    Dec
  • HK$ 2,282
    Jan
  • HK$ 2,628
    Feb
  • HK$ 2,694
    Mar
  • HK$ 1,801
    Apr
  • HK$ 2,160
    May
  • HK$ 3,123
    Jun
  • HK$ 3,947
    Jul
  • HK$ 3,275
    Aug
  • HK$ 2,096
    Sep
  • HK$ 3,683
    Oct

Which day of the week has the cheapest flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average fares by each day of the week from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest day for flights from Ninoy Aquino International Airport to El Nido ENI Airport is Thursday, with average prices lower than other days. Try to avoid departing on Tuesday, as fares are typically the highest.

HK$ 1,446
HK$ 1,401
HK$ 1,356
HK$ 1,311
    Cheapest
  • HK$ 1,426
    Mon
  • HK$ 1,446
    Tue
  • HK$ 1,434
    Wed
  • HK$ 1,356
    Thu
  • HK$ 1,384
    Fri
  • HK$ 1,424
    Sat
  • HK$ 1,383
    Sun

What is the flight schedule from Ninoy Aquino International Airport to El Nido ENI Airport?

Check the schedule for flights from Manila to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. 5J909

    Ninoy Aquino International Airport

    13:30

    MNL

    1h 10m

    Direct

    14:40

    MPH

    S M T W T F S
    Search

  2. DG6707

    Godofredo P. Ramos Airport

    20:15

    MPH

    1h 10m

    Direct

    21:25

    ENI

    - M - W - F -

  3. 5J553

    Ninoy Aquino International Airport

    00:00

    MNL

    1h 30m

    Direct

    01:30

    CEB

    S - T - T - -
    Search

  4. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  5. 5J575

    Ninoy Aquino International Airport

    23:40

    MNL

    1h 35m

    Direct

    01:15

    CEB

    - - - - T F S
    Search

  6. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  7. PR2047

    Ninoy Aquino International Airport

    14:50

    MNL

    1h

    Direct

    15:50

    MPH

    S M T W T F S
    Search

  8. DG6707

    Godofredo P. Ramos Airport

    20:15

    MPH

    1h 10m

    Direct

    21:25

    ENI

    - M - W - F -

  9. 5J583

    Ninoy Aquino International Airport

    23:15

    MNL

    1h 35m

    Direct

    00:50

    CEB

    S M T W T - S
    Search

  10. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  11. 5J2503

    Ninoy Aquino International Airport

    21:55

    MNL

    1h 35m

    Direct

    23:30

    CEB

    S M T W T F S
    Search

  12. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  13. 5J2509

    Ninoy Aquino International Airport

    22:45

    MNL

    1h 35m

    Direct

    00:20

    CEB

    S - - - - - -
    Search

  14. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  15. Z2225

    Ninoy Aquino International Airport

    12:45

    MNL

    1h

    Direct

    13:45

    MPH

    S M T W T F S
    Search

  16. DG6707

    Godofredo P. Ramos Airport

    20:15

    MPH

    1h 10m

    Direct

    21:25

    ENI

    - M - W - F -

  17. 5J2501

    Ninoy Aquino International Airport

    20:35

    MNL

    1h 35m

    Direct

    22:10

    CEB

    - - T - - F -
    Search

  18. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  19. 5J911

    Ninoy Aquino International Airport

    11:30

    MNL

    1h 10m

    Direct

    12:40

    MPH

    S M T W T F S
    Search

  20. DG6707

    Godofredo P. Ramos Airport

    20:15

    MPH

    1h 10m

    Direct

    21:25

    ENI

    - M - W - F -
Find more flights and airlines

FAQs for Ninoy Aquino International Airport to El Nido ENI Airport Flights

  • How many daily flights are there from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI)?

    There are around 2 daily flights from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI).
  • The route from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI) is quite popular. Without considering departure times or holidays, tickets cost around HK$ 1,935 in March, the most expensive month to book this route.
  • The earliest flight departs from Ninoy Aquino International Airport (MNL) at 05:15 and arrives in El Nido ENI Airport (ENI) at 06:45.
  • The latest flight departs from Ninoy Aquino International Airport (MNL) at 18:00 and arrives in El Nido ENI Airport (ENI) at 19:30.
    • The distance from El Nido Airport to downtown is about 5km, by taxi about 20 minutes.
  • AirSWIFT AirLine is a very popular airline operating an average of 6624 flights per month.
  • One-way flights from Ninoy Aquino International Airport to El Nido ENI Airport currently start from HK$ 1,154, and round-trip fares start from HK$ 2,052. The current lowest fare is a Cebu Pacific flight departing on Sat, Jan 9; prices may vary depending on availability.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Ninoy Aquino International Airport to El Nido ENI Airport is HK$ 1,626. Prices may vary depending on the departure date, airline, and availability.
  • AirSWIFT AirLine are the most popular budget airlines flying from Ninoy Aquino International Airport to El Nido ENI Airport, with one-way fares starting from HK$ 1,154. Compare final prices carefully, as baggage, seat selection and payment fees may apply.
  • Enter Ninoy Aquino International Airport and El Nido ENI Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

Popular Destinations & Recommendations

Note: Prices shown on this page are the lowest estimated prices found in the last 24 hours and include all taxes and fees.

Book with no extra fees

Prices displayed on this page are all-inclusive (incl. taxes, fuel surcharges, Civil Aviation Development Fund, etc.), and all fees are shown before payment. Charges for checked baggage, meals, Wi-Fi, and other optional services may also appear in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours, and with many routes refreshed in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the change and cancellation rules for each ticket during the booking process, including all related fees and conditions. Please refer to the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply based on the airline’s fare rules.
Cancellation/change due to a flight schedule change:
If your flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For full details of change and cancellation policies, please refer to the customer support pages.