Trip.com
>
Flights
>
Philippines
>
Mimaropa
>
Flights to El Nido
>
Manila to El Nido flight
>
Ninoy Aquino International Airport to El Nido ENI Airport flight

Search for flights from Manila to El Nido and check out affordable one-way and round-trip options.

      • Cheapest nonstop
        MNL 04:45
        1h 30m
        Direct
        ENI 06:15
        Manila - El Nido | Mon, Aug 10 | AirSWIFT AirLine
        ENI 11:55
        1h 30m
        Direct
        MNL 13:25
        El Nido - Manila | Thu, Aug 13 | AirSWIFT AirLine
        S$ 343 S$ 377
        9% off
        9% off
        S$ 377 S$ 343
      • MNL 16:15
        4h 35m
        1 stop
        ENI 20:50
        Manila - El Nido | Fri, Sep 4 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Fri, Sep 11 | Cebgo
        S$ 147 S$ 377
        61% off
        61% off
        S$ 377 S$ 147
      • MNL 16:15
        4h 20m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Sun, Sep 6 | Cebgo
        S$ 154 S$ 377
        59% off
        59% off
        S$ 377 S$ 154
      • MNL 04:50
        12h 40m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Philippine Airlines
        ENI 16:40
        6h 40m
        1 stop
        MNL 23:20
        El Nido - Manila | Sat, Sep 5 | Cebgo
        S$ 159
        57% off
        S$ 377 S$ 159
      • MNL 09:35
        7h 55m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Cebu Pacific
        ENI 16:40
        7h 30m
        1 stop
        MNL 00:10
        El Nido - Manila | Sat, Sep 5 | Cebgo
        S$ 167
        56% off
        S$ 377 S$ 167
      • MNL 06:45
        10h 45m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Fri, Sep 4 | Cebgo
        S$ 224
        41% off
        S$ 377 S$ 224
      • MNL 03:50
        7h 20m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Cebu Pacific
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Mon, Sep 7 | Cebgo
        S$ 231
        39% off
        S$ 377 S$ 231
      • MNL 16:15
        4h 35m
        1 stop
        ENI 20:50
        Manila - El Nido | Wed, Sep 2 | Cebu Pacific
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Mon, Sep 7 | Cebgo
        S$ 232
        38% off
        S$ 377 S$ 232
      • MNL 05:55
        5h 15m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Philippines AirAsia Inc
        ENI 13:25
        8h 40m
        1 stop
        MNL 22:05
        El Nido - Manila | Thu, Sep 10 | Cebgo
        S$ 283
        25% off
        S$ 377 S$ 283
      • MNL 15:00
        5h 35m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Aug 27 | Cebu Pacific
        ENI 13:25
        6h 45m
        1 stop
        MNL 20:10
        El Nido - Manila | Sat, Aug 29 | Cebgo
        S$ 304
        19% off
        S$ 377 S$ 304
      • MNL 12:10
        4h 50m
        1 stop
        ENI 17:00
        Manila - El Nido | Sat, Aug 29 | Cebu Pacific
        ENI 06:50
        10h 55m
        1 stop
        MNL 17:45
        El Nido - Manila | Wed, Sep 2 | Cebgo
        S$ 311
        18% off
        S$ 377 S$ 311
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Sat, Jul 11 | Normal Airline
        ENI 15:00
        6h
        Direct
        MNL 16:00
        El Nido - Manila | Mon, Jul 13 | Normal Airline
        Find more flights
        Find more flights
      • MNL 15:00
        5h 35m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Cebu Pacific
        S$ 75 S$ 160
        53% off
        53% off
        S$ 160 S$ 75
      • MNL 18:05
        23h 25m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Cebu Pacific
        S$ 84 S$ 160
        48% off
        48% off
        S$ 160 S$ 84
      • MNL 03:50
        7h 20m
        1 stop
        ENI 11:10
        Manila - El Nido | Sat, Sep 5 | Cebu Pacific
        S$ 85 S$ 160
        47% off
        47% off
        S$ 160 S$ 85
      • MNL 05:55
        14h 40m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Philippines AirAsia Inc
        S$ 86
        46% off
        S$ 160 S$ 86
      • MNL 04:50
        12h 40m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Philippine Airlines
        S$ 87
        46% off
        S$ 160 S$ 87
      • MNL 09:35
        7h 55m
        1 stop
        ENI 17:30
        Manila - El Nido | Tue, Sep 1 | Cebu Pacific
        S$ 98
        39% off
        S$ 160 S$ 98
      • MNL 15:45
        25h 45m
        1 stop
        ENI 17:30
        Manila - El Nido | Mon, Aug 31 | Philippine Airlines
        S$ 103
        36% off
        S$ 160 S$ 103
      • MNL 06:45
        10h 15m
        1 stop
        ENI 17:00
        Manila - El Nido | Fri, Aug 28 | Philippines AirAsia Inc
        S$ 143
        11% off
        S$ 160 S$ 143
      • MNL 08:15
        8h 45m
        1 stop
        ENI 17:00
        Manila - El Nido | Fri, Aug 28 | Cebu Pacific
        S$ 144
        10% off
        S$ 160 S$ 144
      • MNL 11:50
        8h 45m
        1 stop
        ENI 20:35
        Manila - El Nido | Thu, Sep 3 | Philippine Airlines
        S$ 145
        9% off
        S$ 160 S$ 145
      • MNL 13:00
        17h 25m
        1 stop
        ENI 14:00
        Manila - El Nido | Sat, Jul 11 | Normal Airline
        Find more flights
        Find more flights

Flight prices from Ninoy Aquino International Airport to El Nido ENI Airport are based on the average fares across airlines for the next three months, based on Trip.com’s latest data.

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to El Nido ENI Airport

Which month has the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average one-way fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in October, with an average price of S$ 158. June sees the highest fares, around S$ 269.

S$ 269
S$ 214
S$ 158
S$ 103
    Cheapest
  • S$ 178
    Jul
  • S$ 180
    Aug
  • S$ 166
    Sep
  • S$ 158
    Oct
  • S$ 208
    Nov
  • S$ 219
    Dec
  • S$ 182
    Jan
  • S$ 212
    Feb
  • S$ 200
    Mar
  • S$ 220
    Apr
  • S$ 252
    May
  • S$ 269
    Jun

Which month has the cheapest round-trip flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average round-trip fares by month from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest round‑trip flights from Ninoy Aquino International Airport to El Nido ENI Airport are usually in April, with an average price of S$ 292. June sees the highest fares, around S$ 506.

S$ 506
S$ 399
S$ 292
S$ 185
    Cheapest
  • S$ 352
    Jul
  • S$ 338
    Aug
  • S$ 335
    Sep
  • S$ 364
    Oct
  • S$ 416
    Nov
  • S$ 446
    Dec
  • S$ 370
    Jan
  • S$ 426
    Feb
  • S$ 436
    Mar
  • S$ 292
    Apr
  • S$ 350
    May
  • S$ 506
    Jun

Which day of the week has the cheapest flights from Ninoy Aquino International Airport to El Nido ENI Airport?

The data is based on Trip.com data from the past 12 months and shows the average fares by each day of the week from Ninoy Aquino International Airport to El Nido ENI Airport.

Based on Trip.com data from the past 12 months, the cheapest day for flights from Ninoy Aquino International Airport to El Nido ENI Airport is Thursday, with average prices lower than other days. Try to avoid departing on Monday, as fares are typically the highest.

S$ 216
S$ 209
S$ 202
S$ 195
    Cheapest
  • S$ 216
    Mon
  • S$ 212
    Tue
  • S$ 215
    Wed
  • S$ 202
    Thu
  • S$ 208
    Fri
  • S$ 212
    Sat
  • S$ 202
    Sun

Selected Airlines from Ninoy Aquino International Airport to El Nido ENI Airport

See which airlines fly from Manila to El Nido. Find the airline that best meets your travel needs by comparing prices and treat yourself to an enjoyable journey.

Cebu Pacific
From S$ 75
Philippines AirAsia Inc
From S$ 86
Philippine Airlines
From S$ 87

Find more flights and airlines

Flight Schedule from Ninoy Aquino International Airport to El Nido ENI Airport

Check the schedule for flights from Manila to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. Z2781

    Ninoy Aquino International Airport

    16:00

    MNL

    1h 25m

    Direct

    17:25

    CEB

    S M T W T F S
    Search

  2. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S

  3. 5J903

    Ninoy Aquino International Airport

    12:10

    MNL

    1h 10m

    Direct

    13:20

    MPH

    S M T W T F S
    Search

  4. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  5. PR2037

    Ninoy Aquino International Airport

    12:10

    MNL

    1h

    Direct

    13:10

    MPH

    S M T W T F S
    Search

  6. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  7. 5J581

    Ninoy Aquino International Airport

    15:00

    MNL

    1h 30m

    Direct

    16:30

    CEB

    S M T W T F S
    Search

  8. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S

  9. Z2219

    Ninoy Aquino International Airport

    07:25

    MNL

    1h

    Direct

    08:25

    MPH

    - M - W - F -
    Search

  10. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  11. Z2221

    Ninoy Aquino International Airport

    10:40

    MNL

    1h

    Direct

    11:40

    MPH

    S M T W T F S
    Search

  12. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  13. 5J563

    Ninoy Aquino International Airport

    03:40

    MNL

    1h 40m

    Direct

    05:20

    CEB

    S M T W T F S
    Search

  14. DG5337

    Mactan-Cebu International Airport

    09:20

    CEB

    1h 50m

    Direct

    11:10

    ENI

    S M T W T F S

  15. 5J617

    Ninoy Aquino International Airport

    09:35

    MNL

    1h 45m

    Direct

    11:20

    TAG

    S M T W T F S
    Search

  16. DG5611

    Panglao International Airport

    15:40

    TAG

    1h 45m

    Direct

    17:25

    ENI

    S - - W - F -

  17. 5J901

    Ninoy Aquino International Airport

    08:15

    MNL

    1h 10m

    Direct

    09:25

    MPH

    S M T W T F S
    Search

  18. DG5411

    Godofredo P. Ramos Airport

    15:50

    MPH

    1h 10m

    Direct

    17:00

    ENI

    S M T W T F S

  19. PR2853

    Ninoy Aquino International Airport

    12:20

    MNL

    1h 20m

    Direct

    13:40

    CEB

    - M - W T F S
    Search

  20. DG6254

    Mactan-Cebu International Airport

    18:50

    CEB

    1h 45m

    Direct

    20:35

    ENI

    S M T W T F S
Find more flights and airlines

Ninoy Aquino International Airport to El Nido ENI Airport Flights Info

Flight distance 407.32km
Cheapest one-way ticket price S$ 75
Cheapest return ticket price S$ 147

FAQs for Ninoy Aquino International Airport to El Nido ENI Airport Flights

  • How long is a flight from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI)?

    It takes around 1 hour 33 minutes to fly from Ninoy Aquino International Airport (mnl) to El Nido ENI Airport (eni).
  • There are around 2 daily flights from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI).
  • Tickets cost around S$ 313 in March, making it the cheapest month to book. Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI) is a popular route, so don't forget to book your tickets in advance.
  • The route from Ninoy Aquino International Airport (MNL) to El Nido ENI Airport (ENI) is quite popular. Without considering departure times or holidays, tickets cost around S$ 313 in March, the most expensive month to book this route.
  • The earliest flight departs from Ninoy Aquino International Airport (MNL) at 05:15 and arrives in El Nido ENI Airport (ENI) at 06:45.
  • The latest flight departs from Ninoy Aquino International Airport (MNL) at 18:00 and arrives in El Nido ENI Airport (ENI) at 19:30.
    • The distance from El Nido Airport to downtown is about 5km, by taxi about 20 minutes.
  • AirSWIFT AirLine is a very popular airline operating an average of 6624 flights per month.

Popular Destinations & Recommendations

Note: Prices shown on this page are the lowest estimated prices found in the last 24 hours and include all taxes and fees.

Book with no extra fees

Prices displayed on this page are all-inclusive (incl. taxes, fuel surcharges, Civil Aviation Development Fund, etc.), and all fees are shown before payment. Charges for checked baggage, meals, Wi-Fi, and other optional services may also appear in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours, and with many routes refreshed in real time. The more popular the route, the more accurate the data.

Change & Cancellation Policy

Trip.com shows the change and cancellation rules for each ticket during the booking process, including all related fees and conditions. Please refer to the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply based on the airline’s fare rules.
Cancellation/change due to a flight schedule change:
If your flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For full details of change and cancellation policies, please refer to the customer support pages.