Trip.com
>
Flights
>
Malaysia
>
Indonesia to Malaysia flight

Flying From Indonesia to Malaysia: What You Need to Know

Cheapest one-way flight priceS$ 38
Cheapest return ticket priceS$ 62
Off-season for travelOctober
Peak season for travelJuly
Popular airlineBatik Air Malaysia
Cheapest monthNovember

Compare multiple airlines at once to find the best flight deals from Indonesia to Malaysia.

Airlines Flying From Indonesia to Malaysia
Batik Air Malaysia logo Batik Air Malaysia
AirAsia Berhad logo AirAsia Berhad
Indonesia Airasia logo Indonesia Airasia
Malaysia Airlines logo Malaysia Airlines
TransNusa logo TransNusa
Garuda Indonesia logo Garuda Indonesia
Batik Air logo Batik Air
Super Air Jet logo Super Air Jet
Citilink logo Citilink
Singapore Airlines logo Singapore Airlines
KLM Royal Dutch Airlines logo KLM Royal Dutch Airlines
Lion Air logo Lion Air
Scoot logo Scoot
Firefly logo Firefly

Search Flights From Indonesia to Malaysia

Easily compare flights from Indonesia to Malaysia and find the cheapest tickets available!

Looking for affordable flights from Indonesia to Malaysia? Check out these great prices for the next 90 days, starting at just S$ 38 for a one-way ticket and S$ 62 for a round-trip.

      • Cheapest nonstop
        Sat, Aug 1
        KNO
        PEN
        |
        Medan
        Penang
        Direct | Batik Air Malaysia
        Mon, Aug 3
        PEN
        KNO
        |
        Penang
        Medan
        Direct | Batik Air Malaysia
        S$ 62 S$ 238
        74% off
        74% off
        S$ 238 S$ 62
      • Wed, Jul 22
        PDG
        KUL
        |
        Padang
        Kuala Lumpur
        Direct | AirAsia
        Wed, Jul 22
        KUL
        PDG
        |
        Kuala Lumpur
        Padang
        Direct | AirAsia
        S$ 82 S$ 238
        66% off
        66% off
        S$ 238 S$ 82
      • Wed, Jul 22
        PNK
        KCH
        |
        Pontianak
        Kuching
        Direct | AirAsia
        Sat, Jul 25
        KCH
        PNK
        |
        Kuching
        Pontianak
        Direct | AirAsia
        S$ 95 S$ 238
        60% off
        60% off
        S$ 238 S$ 95
      • Mon, Aug 17
        CGK
        KBR
        |
        Jakarta
        Kota Bharu
        Direct | AirAsia
        Thu, Aug 20
        KBR
        CGK
        |
        Kota Bharu
        Jakarta
        Direct | AirAsia
        S$ 97
        59% off
        S$ 238 S$ 97
      • Thu, Jul 30
        KNO
        KUL
        |
        Medan
        Kuala Lumpur
        Direct | AirAsia
        Thu, Aug 6
        KUL
        KNO
        |
        Kuala Lumpur
        Medan
        Direct | Indonesia Airasia
        S$ 101
        57% off
        S$ 238 S$ 101
      • Sun, Aug 9
        BTJ
        PEN
        |
        Banda Aceh
        Penang
        Direct | Malaysia Airlines
        Wed, Aug 12
        PEN
        BTJ
        |
        Penang
        Banda Aceh
        Direct | Firefly Airline
        S$ 112
        53% off
        S$ 238 S$ 112
      • Mon, Aug 10
        BTH
        KUL
        |
        Batam
        Kuala Lumpur
        Direct | AirAsia
        Mon, Aug 17
        KUL
        BTH
        |
        Kuala Lumpur
        Batam
        Direct | AirAsia
        S$ 113
        53% off
        S$ 238 S$ 113
      • Mon, Jul 20
        PKU
        KUL
        |
        Pekanbaru
        Kuala Lumpur
        Direct | AirAsia
        Wed, Jul 22
        KUL
        PKU
        |
        Kuala Lumpur
        Pekanbaru
        Direct | AirAsia
        S$ 142
        40% off
        S$ 238 S$ 142
      • Sun, Aug 9
        BTJ
        KUL
        |
        Banda Aceh
        Kuala Lumpur
        Direct | AirAsia
        Thu, Aug 13
        KUL
        BTJ
        |
        Kuala Lumpur
        Banda Aceh
        Direct | AirAsia
        S$ 168
        28% off
        S$ 238 S$ 168
      • Sun, Jul 19
        CGK
        KUL
        |
        Jakarta
        Kuala Lumpur
        Direct | AirAsia
        Thu, Jul 23
        KUL
        CGK
        |
        Kuala Lumpur
        Jakarta
        Direct | AirAsia
        S$ 221
        7% off
        S$ 238 S$ 221
      • Mon, Jul 20
        JKT
        KUL
        |
        Jakarta
        Kuala Lumpur
        1 stop | Normal Airline
        Wed, Jul 22
        KUL
        JKT
        |
        Kuala Lumpur
        Jakarta
        Direct | Normal Airline
        Find more flights
        Find more flights
      • Cheapest nonstop
        Fri, Sep 4
        KNO
        PEN
        |
        Medan
        Penang
        Direct | Indonesia Airasia
        S$ 38 S$ 136
        72% off
        72% off
        S$ 136 S$ 38
      • Sat, Aug 1
        PDG
        KUL
        |
        Padang
        Kuala Lumpur
        Direct | Batik Air Malaysia
        S$ 47 S$ 136
        65% off
        65% off
        S$ 136 S$ 47
      • Mon, Aug 3
        KNO
        KUL
        |
        Medan
        Kuala Lumpur
        Direct | Indonesia Airasia
        S$ 53 S$ 136
        61% off
        61% off
        S$ 136 S$ 53
      • Mon, Jul 27
        PNK
        KCH
        |
        Pontianak
        Kuching
        Direct | AirAsia
        S$ 53
        61% off
        S$ 136 S$ 53
      • Mon, Aug 10
        BTJ
        KUL
        |
        Banda Aceh
        Kuala Lumpur
        Direct | AirAsia
        S$ 56
        59% off
        S$ 136 S$ 56
      • Mon, Aug 3
        PKU
        KUL
        |
        Pekanbaru
        Kuala Lumpur
        Direct | AirAsia
        S$ 56
        59% off
        S$ 136 S$ 56
      • Sat, Aug 22
        BTH
        KUL
        |
        Batam
        Kuala Lumpur
        Direct | AirAsia
        S$ 58
        56% off
        S$ 136 S$ 58
      • Thu, Sep 10
        PNK
        KUL
        |
        Pontianak
        Kuala Lumpur
        Direct | AirAsia
        S$ 65
        52% off
        S$ 136 S$ 65
      • Sat, Aug 1
        CGK
        KBR
        |
        Jakarta
        Kota Bharu
        Direct | AirAsia
        S$ 87
        36% off
        S$ 136 S$ 87
      • Tue, Aug 11
        BTJ
        PEN
        |
        Banda Aceh
        Penang
        Direct | Firefly Airline
        S$ 126
        7% off
        S$ 136 S$ 126
      • Mon, Jul 20
        JKT
        KUL
        |
        Jakarta
        Kuala Lumpur
        1 stop | Normal Airline
        Find more flights
        Find more flights

country_to_country.flight_disclaimer

FAQs: Flights From Indonesia to Malaysia

  • When is it the cheapest time to fly from Indonesia to Malaysia?

    According to our flights calendar over the next 90 days, it seems the cheapest date is on 2026-07-30 for one-way flights.
  • The cheapest return flight from Indonesia to Malaysia is on the route from Jakarta to Kuala Lumpur, with prices starting at S$ 62 for a return trip between 2026-07-30 and 2026-08-01.
  • Based on our flight data, the average flight time from Indonesia to Malaysia is approximately 2 hours 10 minutes based on our most popular routes from Jakarta to Kuala Lumpur. The time may also vary depending on your destination.
  • The cheapest airline flying to Malaysia from Indonesia is Batik Air Malaysia serving the route from Jakarta to Kuala Lumpur.
  • AirAsia Berhad are airlines that fly frequently from Indonesia to Malaysia. The overall price will vary depending on your destination and travel dates. Budget airlines generally offer lower prices to Australia, but they may have limited baggage allowance, reduced onboard services, and longer commuting times to secondary airports.

Find Cheap Flights and Deals with Trip.com